Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5482 |
| Number of amino acids: | 201 |
| Molecular Weight: | 20364.58 Da |
| Theoretical pI: | 7.63 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 14 | 6.97% |
| Cysteine CYS (C) | 10 | 4.98% |
| Glutamic Acid GLU (E) | 0 | 0% |
| Aspartic Acid ASP (D) | 8 | 3.98% |
| Glycine GLY (G) | 23 | 11.44% |
| Phynylalanine PHE (F) | 10 | 4.98% |
| Isoleucine ILE (I) | 3 | 1.49% |
| Histidine HIS (H) | 2 | 1% |
| Lysine LYS (K) | 8 | 3.98% |
| Methionine MET (M) | 2 | 1% |
| Leucine LEU (L) | 18 | 8.96% |
| Asparagine ASN (N) | 15 | 7.46% |
| Glutamine GLN (Q) | 4 | 1.99% |
| Proline PRO (P) | 14 | 6.97% |
| Serine SER (S) | 30 | 14.93% |
| Arginine ARG (R) | 1 | 0.5% |
| Threonine THR (T) | 26 | 12.94% |
| Tryptophan TRP (W) | 1 | 0.5% |
| Valine VAL (V) | 7 | 3.48% |
| Tyrosine TYR (Y) | 5 | 2.49% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 877 |
| Hydrogen | H | 1362 |
| Nitrogen | N | 236 |
| Oxygen | O | 298 |
| Sulphur | S | 12 |
| Formula | C877H1362N236O298S12 |
| Total Number of Atoms: | 2785 |
| Total number of positively charged residues (ARG + LYS): | 9 |
| Total number of negatively charged residues (ASP + GLU): | 8 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 13575 Absorption 0.1% (=1 g/l) 0.667, assuming all pairs of CYS residues form cystines Ext. coefficient 12950 Absorption 0.1% (=1 g/l) 0.636, assuming all CYS residues are reduced |
| Aromaticity: | 0.080 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 28.05 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [21.89, 40.80, 16.92] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 57.8109 |
| Grand average of hydropathicity (GRAVY): | -0.12 |