Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5475 |
| Number of amino acids: | 339 |
| Molecular Weight: | 35938.74 Da |
| Theoretical pI: | 6.76 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 35 | 10.32% |
| Cysteine CYS (C) | 10 | 2.95% |
| Glutamic Acid GLU (E) | 11 | 3.24% |
| Aspartic Acid ASP (D) | 9 | 2.65% |
| Glycine GLY (G) | 31 | 9.14% |
| Phynylalanine PHE (F) | 22 | 6.49% |
| Isoleucine ILE (I) | 33 | 9.73% |
| Histidine HIS (H) | 8 | 2.36% |
| Lysine LYS (K) | 16 | 4.72% |
| Methionine MET (M) | 16 | 4.72% |
| Leucine LEU (L) | 41 | 12.09% |
| Asparagine ASN (N) | 11 | 3.24% |
| Glutamine GLN (Q) | 7 | 2.06% |
| Proline PRO (P) | 15 | 4.42% |
| Serine SER (S) | 27 | 7.96% |
| Arginine ARG (R) | 3 | 0.88% |
| Threonine THR (T) | 17 | 5.01% |
| Tryptophan TRP (W) | 2 | 0.59% |
| Valine VAL (V) | 20 | 5.9% |
| Tyrosine TYR (Y) | 5 | 1.47% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1642 |
| Hydrogen | H | 2608 |
| Nitrogen | N | 400 |
| Oxygen | O | 447 |
| Sulphur | S | 26 |
| Formula | C1642H2608N400O447S26 |
| Total Number of Atoms: | 5123 |
| Total number of positively charged residues (ARG + LYS): | 19 |
| Total number of negatively charged residues (ASP + GLU): | 20 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 19075 Absorption 0.1% (=1 g/l) 0.531, assuming all pairs of CYS residues form cystines Ext. coefficient 18450 Absorption 0.1% (=1 g/l) 0.513, assuming all CYS residues are reduced |
| Aromaticity: | 0.086 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.09 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [36.28, 24.78, 30.38] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 112.566 |
| Grand average of hydropathicity (GRAVY): | 0.75 |