Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5433 |
| Number of amino acids: | 305 |
| Molecular Weight: | 31370.29 Da |
| Theoretical pI: | 5.61 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 64 | 20.98% |
| Cysteine CYS (C) | 3 | 0.98% |
| Glutamic Acid GLU (E) | 19 | 6.23% |
| Aspartic Acid ASP (D) | 11 | 3.61% |
| Glycine GLY (G) | 17 | 5.57% |
| Phynylalanine PHE (F) | 10 | 3.28% |
| Isoleucine ILE (I) | 14 | 4.59% |
| Histidine HIS (H) | 5 | 1.64% |
| Lysine LYS (K) | 20 | 6.56% |
| Methionine MET (M) | 4 | 1.31% |
| Leucine LEU (L) | 11 | 3.61% |
| Asparagine ASN (N) | 7 | 2.3% |
| Glutamine GLN (Q) | 9 | 2.95% |
| Proline PRO (P) | 19 | 6.23% |
| Serine SER (S) | 26 | 8.52% |
| Arginine ARG (R) | 5 | 1.64% |
| Threonine THR (T) | 25 | 8.2% |
| Tryptophan TRP (W) | 1 | 0.33% |
| Valine VAL (V) | 24 | 7.87% |
| Tyrosine TYR (Y) | 11 | 3.61% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1390 |
| Hydrogen | H | 2189 |
| Nitrogen | N | 367 |
| Oxygen | O | 444 |
| Sulphur | S | 7 |
| Formula | C1390H2189N367O444S7 |
| Total Number of Atoms: | 4397 |
| Total number of positively charged residues (ARG + LYS): | 25 |
| Total number of negatively charged residues (ASP + GLU): | 30 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 22015 Absorption 0.1% (=1 g/l) 0.702, assuming all pairs of CYS residues form cystines Ext. coefficient 21890 Absorption 0.1% (=1 g/l) 0.698, assuming all CYS residues are reduced |
| Aromaticity: | 0.072 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.84 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [23.28, 22.62, 32.13] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.7705 |
| Grand average of hydropathicity (GRAVY): | -0.01 |