Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5432 |
| Number of amino acids: | 234 |
| Molecular Weight: | 26293.95 Da |
| Theoretical pI: | 5.86 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 22 | 9.4% |
| Cysteine CYS (C) | 2 | 0.85% |
| Glutamic Acid GLU (E) | 28 | 11.97% |
| Aspartic Acid ASP (D) | 8 | 3.42% |
| Glycine GLY (G) | 14 | 5.98% |
| Phynylalanine PHE (F) | 12 | 5.13% |
| Isoleucine ILE (I) | 6 | 2.56% |
| Histidine HIS (H) | 12 | 5.13% |
| Lysine LYS (K) | 21 | 8.97% |
| Methionine MET (M) | 4 | 1.71% |
| Leucine LEU (L) | 26 | 11.11% |
| Asparagine ASN (N) | 10 | 4.27% |
| Glutamine GLN (Q) | 9 | 3.85% |
| Proline PRO (P) | 7 | 2.99% |
| Serine SER (S) | 14 | 5.98% |
| Arginine ARG (R) | 7 | 2.99% |
| Threonine THR (T) | 5 | 2.14% |
| Tryptophan TRP (W) | 3 | 1.28% |
| Valine VAL (V) | 21 | 8.97% |
| Tyrosine TYR (Y) | 3 | 1.28% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1179 |
| Hydrogen | H | 1848 |
| Nitrogen | N | 322 |
| Oxygen | O | 348 |
| Sulphur | S | 6 |
| Formula | C1179H1848N322O348S6 |
| Total Number of Atoms: | 3703 |
| Total number of positively charged residues (ARG + LYS): | 28 |
| Total number of negatively charged residues (ASP + GLU): | 36 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 21095 Absorption 0.1% (=1 g/l) 0.802, assuming all pairs of CYS residues form cystines Ext. coefficient 20970 Absorption 0.1% (=1 g/l) 0.798, assuming all CYS residues are reduced |
| Aromaticity: | 0.077 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 27.74 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.34, 19.23, 34.19] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 88.7606 |
| Grand average of hydropathicity (GRAVY): | -0.35 |