Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5424 |
| Number of amino acids: | 259 |
| Molecular Weight: | 27203.81 Da |
| Theoretical pI: | 7.01 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 28 | 10.81% |
| Cysteine CYS (C) | 10 | 3.86% |
| Glutamic Acid GLU (E) | 10 | 3.86% |
| Aspartic Acid ASP (D) | 8 | 3.09% |
| Glycine GLY (G) | 32 | 12.36% |
| Phynylalanine PHE (F) | 10 | 3.86% |
| Isoleucine ILE (I) | 14 | 5.41% |
| Histidine HIS (H) | 3 | 1.16% |
| Lysine LYS (K) | 8 | 3.09% |
| Methionine MET (M) | 6 | 2.32% |
| Leucine LEU (L) | 13 | 5.02% |
| Asparagine ASN (N) | 14 | 5.41% |
| Glutamine GLN (Q) | 7 | 2.7% |
| Proline PRO (P) | 15 | 5.79% |
| Serine SER (S) | 24 | 9.27% |
| Arginine ARG (R) | 10 | 3.86% |
| Threonine THR (T) | 10 | 3.86% |
| Tryptophan TRP (W) | 3 | 1.16% |
| Valine VAL (V) | 21 | 8.11% |
| Tyrosine TYR (Y) | 13 | 5.02% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1201 |
| Hydrogen | H | 1847 |
| Nitrogen | N | 327 |
| Oxygen | O | 364 |
| Sulphur | S | 16 |
| Formula | C1201H1847N327O364S16 |
| Total Number of Atoms: | 3755 |
| Total number of positively charged residues (ARG + LYS): | 18 |
| Total number of negatively charged residues (ASP + GLU): | 18 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 36495 Absorption 0.1% (=1 g/l) 1.342, assuming all pairs of CYS residues form cystines Ext. coefficient 35870 Absorption 0.1% (=1 g/l) 1.319, assuming all CYS residues are reduced |
| Aromaticity: | 0.100 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 32.82 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.57, 32.82, 22.01] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.9807 |
| Grand average of hydropathicity (GRAVY): | 0.04 |