Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5419 |
| Number of amino acids: | 125 |
| Molecular Weight: | 14421.63 Da |
| Theoretical pI: | 8.59 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 7 | 5.6% |
| Cysteine CYS (C) | 2 | 1.6% |
| Glutamic Acid GLU (E) | 14 | 11.2% |
| Aspartic Acid ASP (D) | 2 | 1.6% |
| Glycine GLY (G) | 7 | 5.6% |
| Phynylalanine PHE (F) | 6 | 4.8% |
| Isoleucine ILE (I) | 7 | 5.6% |
| Histidine HIS (H) | 3 | 2.4% |
| Lysine LYS (K) | 14 | 11.2% |
| Methionine MET (M) | 5 | 4% |
| Leucine LEU (L) | 11 | 8.8% |
| Asparagine ASN (N) | 6 | 4.8% |
| Glutamine GLN (Q) | 9 | 7.2% |
| Proline PRO (P) | 1 | 0.8% |
| Serine SER (S) | 8 | 6.4% |
| Arginine ARG (R) | 4 | 3.2% |
| Threonine THR (T) | 8 | 6.4% |
| Tryptophan TRP (W) | 3 | 2.4% |
| Valine VAL (V) | 7 | 5.6% |
| Tyrosine TYR (Y) | 1 | 0.8% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 639 |
| Hydrogen | H | 1023 |
| Nitrogen | N | 175 |
| Oxygen | O | 190 |
| Sulphur | S | 7 |
| Formula | C639H1023N175O190S7 |
| Total Number of Atoms: | 2034 |
| Total number of positively charged residues (ARG + LYS): | 18 |
| Total number of negatively charged residues (ASP + GLU): | 16 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 18115 Absorption 0.1% (=1 g/l) 1.256, assuming all pairs of CYS residues form cystines Ext. coefficient 17990 Absorption 0.1% (=1 g/l) 1.247, assuming all CYS residues are reduced |
| Aromaticity: | 0.080 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.63 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.00, 17.60, 29.60] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 78 |
| Grand average of hydropathicity (GRAVY): | -0.52 |