Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5415 |
| Number of amino acids: | 302 |
| Molecular Weight: | 34316.51 Da |
| Theoretical pI: | 7.25 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 17 | 5.63% |
| Cysteine CYS (C) | 9 | 2.98% |
| Glutamic Acid GLU (E) | 23 | 7.62% |
| Aspartic Acid ASP (D) | 11 | 3.64% |
| Glycine GLY (G) | 12 | 3.97% |
| Phynylalanine PHE (F) | 15 | 4.97% |
| Isoleucine ILE (I) | 15 | 4.97% |
| Histidine HIS (H) | 8 | 2.65% |
| Lysine LYS (K) | 12 | 3.97% |
| Methionine MET (M) | 8 | 2.65% |
| Leucine LEU (L) | 37 | 12.25% |
| Asparagine ASN (N) | 8 | 2.65% |
| Glutamine GLN (Q) | 15 | 4.97% |
| Proline PRO (P) | 13 | 4.3% |
| Serine SER (S) | 30 | 9.93% |
| Arginine ARG (R) | 22 | 7.28% |
| Threonine THR (T) | 19 | 6.29% |
| Tryptophan TRP (W) | 2 | 0.66% |
| Valine VAL (V) | 19 | 6.29% |
| Tyrosine TYR (Y) | 7 | 2.32% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1518 |
| Hydrogen | H | 2423 |
| Nitrogen | N | 421 |
| Oxygen | O | 450 |
| Sulphur | S | 17 |
| Formula | C1518H2423N421O450S17 |
| Total Number of Atoms: | 4829 |
| Total number of positively charged residues (ARG + LYS): | 34 |
| Total number of negatively charged residues (ASP + GLU): | 34 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 21930 Absorption 0.1% (=1 g/l) 0.639, assuming all pairs of CYS residues form cystines Ext. coefficient 21430 Absorption 0.1% (=1 g/l) 0.624, assuming all CYS residues are reduced |
| Aromaticity: | 0.079 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 53.97 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.46, 20.86, 28.15] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 91.0267 |
| Grand average of hydropathicity (GRAVY): | -0.15 |