Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5409 |
| Number of amino acids: | 172 |
| Molecular Weight: | 20114.26 Da |
| Theoretical pI: | 5.99 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 11 | 6.4% |
| Cysteine CYS (C) | 8 | 4.65% |
| Glutamic Acid GLU (E) | 14 | 8.14% |
| Aspartic Acid ASP (D) | 12 | 6.98% |
| Glycine GLY (G) | 8 | 4.65% |
| Phynylalanine PHE (F) | 3 | 1.74% |
| Isoleucine ILE (I) | 3 | 1.74% |
| Histidine HIS (H) | 3 | 1.74% |
| Lysine LYS (K) | 3 | 1.74% |
| Methionine MET (M) | 4 | 2.33% |
| Leucine LEU (L) | 17 | 9.88% |
| Asparagine ASN (N) | 7 | 4.07% |
| Glutamine GLN (Q) | 24 | 13.95% |
| Proline PRO (P) | 11 | 6.4% |
| Serine SER (S) | 13 | 7.56% |
| Arginine ARG (R) | 21 | 12.21% |
| Threonine THR (T) | 1 | 0.58% |
| Tryptophan TRP (W) | 1 | 0.58% |
| Valine VAL (V) | 2 | 1.16% |
| Tyrosine TYR (Y) | 6 | 3.49% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 841 |
| Hydrogen | H | 1336 |
| Nitrogen | N | 276 |
| Oxygen | O | 276 |
| Sulphur | S | 12 |
| Formula | C841H1336N276O276S12 |
| Total Number of Atoms: | 2741 |
| Total number of positively charged residues (ARG + LYS): | 24 |
| Total number of negatively charged residues (ASP + GLU): | 26 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 14940 Absorption 0.1% (=1 g/l) 0.743, assuming all pairs of CYS residues form cystines Ext. coefficient 14440 Absorption 0.1% (=1 g/l) 0.718, assuming all CYS residues are reduced |
| Aromaticity: | 0.058 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 74.13 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [18.60, 22.67, 26.74] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 55.1163 |
| Grand average of hydropathicity (GRAVY): | -1.24 |