Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5396 |
| Number of amino acids: | 172 |
| Molecular Weight: | 20392.75 Da |
| Theoretical pI: | 7.06 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 6 | 3.49% |
| Cysteine CYS (C) | 8 | 4.65% |
| Glutamic Acid GLU (E) | 16 | 9.3% |
| Aspartic Acid ASP (D) | 11 | 6.4% |
| Glycine GLY (G) | 7 | 4.07% |
| Phynylalanine PHE (F) | 6 | 3.49% |
| Isoleucine ILE (I) | 4 | 2.33% |
| Histidine HIS (H) | 3 | 1.74% |
| Lysine LYS (K) | 2 | 1.16% |
| Methionine MET (M) | 7 | 4.07% |
| Leucine LEU (L) | 13 | 7.56% |
| Asparagine ASN (N) | 4 | 2.33% |
| Glutamine GLN (Q) | 15 | 8.72% |
| Proline PRO (P) | 10 | 5.81% |
| Serine SER (S) | 19 | 11.05% |
| Arginine ARG (R) | 25 | 14.53% |
| Threonine THR (T) | 5 | 2.91% |
| Tryptophan TRP (W) | 2 | 1.16% |
| Valine VAL (V) | 4 | 2.33% |
| Tyrosine TYR (Y) | 5 | 2.91% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 856 |
| Hydrogen | H | 1354 |
| Nitrogen | N | 276 |
| Oxygen | O | 275 |
| Sulphur | S | 15 |
| Formula | C856H1354N276O275S15 |
| Total Number of Atoms: | 2776 |
| Total number of positively charged residues (ARG + LYS): | 27 |
| Total number of negatively charged residues (ASP + GLU): | 27 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 18950 Absorption 0.1% (=1 g/l) 0.929, assuming all pairs of CYS residues form cystines Ext. coefficient 18450 Absorption 0.1% (=1 g/l) 0.905, assuming all CYS residues are reduced |
| Aromaticity: | 0.076 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 95.44 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [19.77, 23.26, 24.42] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 48.7791 |
| Grand average of hydropathicity (GRAVY): | -1.11 |