Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5392 |
| Number of amino acids: | 253 |
| Molecular Weight: | 27632.71 Da |
| Theoretical pI: | 5.08 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 22 | 8.7% |
| Cysteine CYS (C) | 7 | 2.77% |
| Glutamic Acid GLU (E) | 10 | 3.95% |
| Aspartic Acid ASP (D) | 15 | 5.93% |
| Glycine GLY (G) | 30 | 11.86% |
| Phynylalanine PHE (F) | 17 | 6.72% |
| Isoleucine ILE (I) | 16 | 6.32% |
| Histidine HIS (H) | 2 | 0.79% |
| Lysine LYS (K) | 5 | 1.98% |
| Methionine MET (M) | 5 | 1.98% |
| Leucine LEU (L) | 12 | 4.74% |
| Asparagine ASN (N) | 20 | 7.91% |
| Glutamine GLN (Q) | 10 | 3.95% |
| Proline PRO (P) | 11 | 4.35% |
| Serine SER (S) | 14 | 5.53% |
| Arginine ARG (R) | 15 | 5.93% |
| Threonine THR (T) | 18 | 7.11% |
| Tryptophan TRP (W) | 3 | 1.19% |
| Valine VAL (V) | 10 | 3.95% |
| Tyrosine TYR (Y) | 11 | 4.35% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1216 |
| Hydrogen | H | 1834 |
| Nitrogen | N | 340 |
| Oxygen | O | 377 |
| Sulphur | S | 12 |
| Formula | C1216H1834N340O377S12 |
| Total Number of Atoms: | 3779 |
| Total number of positively charged residues (ARG + LYS): | 20 |
| Total number of negatively charged residues (ASP + GLU): | 25 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 33265 Absorption 0.1% (=1 g/l) 1.204, assuming all pairs of CYS residues form cystines Ext. coefficient 32890 Absorption 0.1% (=1 g/l) 1.190, assuming all CYS residues are reduced |
| Aromaticity: | 0.123 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.95 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.27, 29.64, 19.37] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 63.3201 |
| Grand average of hydropathicity (GRAVY): | -0.33 |