Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5391 |
| Number of amino acids: | 690 |
| Molecular Weight: | 76858.56 Da |
| Theoretical pI: | 8.56 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 40 | 5.8% |
| Cysteine CYS (C) | 16 | 2.32% |
| Glutamic Acid GLU (E) | 30 | 4.35% |
| Aspartic Acid ASP (D) | 39 | 5.65% |
| Glycine GLY (G) | 48 | 6.96% |
| Phynylalanine PHE (F) | 36 | 5.22% |
| Isoleucine ILE (I) | 44 | 6.38% |
| Histidine HIS (H) | 16 | 2.32% |
| Lysine LYS (K) | 33 | 4.78% |
| Methionine MET (M) | 13 | 1.88% |
| Leucine LEU (L) | 62 | 8.99% |
| Asparagine ASN (N) | 41 | 5.94% |
| Glutamine GLN (Q) | 21 | 3.04% |
| Proline PRO (P) | 36 | 5.22% |
| Serine SER (S) | 64 | 9.28% |
| Arginine ARG (R) | 43 | 6.23% |
| Threonine THR (T) | 37 | 5.36% |
| Tryptophan TRP (W) | 7 | 1.01% |
| Valine VAL (V) | 44 | 6.38% |
| Tyrosine TYR (Y) | 20 | 2.9% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3413 |
| Hydrogen | H | 5353 |
| Nitrogen | N | 953 |
| Oxygen | O | 1012 |
| Sulphur | S | 29 |
| Formula | C3413H5353N953O1012S29 |
| Total Number of Atoms: | 10760 |
| Total number of positively charged residues (ARG + LYS): | 76 |
| Total number of negatively charged residues (ASP + GLU): | 69 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 69300 Absorption 0.1% (=1 g/l) 0.902, assuming all pairs of CYS residues form cystines Ext. coefficient 68300 Absorption 0.1% (=1 g/l) 0.889, assuming all CYS residues are reduced |
| Aromaticity: | 0.091 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 43.82 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.87, 27.39, 21.01] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 84.2029 |
| Grand average of hydropathicity (GRAVY): | -0.23 |