Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5389 |
| Number of amino acids: | 730 |
| Molecular Weight: | 81210.49 Da |
| Theoretical pI: | 6.35 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 25 | 3.42% |
| Cysteine CYS (C) | 25 | 3.42% |
| Glutamic Acid GLU (E) | 51 | 6.99% |
| Aspartic Acid ASP (D) | 37 | 5.07% |
| Glycine GLY (G) | 57 | 7.81% |
| Phynylalanine PHE (F) | 28 | 3.84% |
| Isoleucine ILE (I) | 44 | 6.03% |
| Histidine HIS (H) | 11 | 1.51% |
| Lysine LYS (K) | 46 | 6.3% |
| Methionine MET (M) | 18 | 2.47% |
| Leucine LEU (L) | 63 | 8.63% |
| Asparagine ASN (N) | 46 | 6.3% |
| Glutamine GLN (Q) | 16 | 2.19% |
| Proline PRO (P) | 33 | 4.52% |
| Serine SER (S) | 64 | 8.77% |
| Arginine ARG (R) | 38 | 5.21% |
| Threonine THR (T) | 49 | 6.71% |
| Tryptophan TRP (W) | 4 | 0.55% |
| Valine VAL (V) | 50 | 6.85% |
| Tyrosine TYR (Y) | 25 | 3.42% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3557 |
| Hydrogen | H | 5654 |
| Nitrogen | N | 978 |
| Oxygen | O | 1107 |
| Sulphur | S | 43 |
| Formula | C3557H5654N978O1107S43 |
| Total Number of Atoms: | 11339 |
| Total number of positively charged residues (ARG + LYS): | 84 |
| Total number of negatively charged residues (ASP + GLU): | 88 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 60750 Absorption 0.1% (=1 g/l) 0.748, assuming all pairs of CYS residues form cystines Ext. coefficient 59250 Absorption 0.1% (=1 g/l) 0.730, assuming all CYS residues are reduced |
| Aromaticity: | 0.078 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.80 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.32, 27.40, 21.51] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 80.4521 |
| Grand average of hydropathicity (GRAVY): | -0.33 |