Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5376 |
| Number of amino acids: | 204 |
| Molecular Weight: | 21961.25 Da |
| Theoretical pI: | 9.08 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 11 | 5.39% |
| Cysteine CYS (C) | 1 | 0.49% |
| Glutamic Acid GLU (E) | 11 | 5.39% |
| Aspartic Acid ASP (D) | 8 | 3.92% |
| Glycine GLY (G) | 27 | 13.24% |
| Phynylalanine PHE (F) | 12 | 5.88% |
| Isoleucine ILE (I) | 10 | 4.9% |
| Histidine HIS (H) | 6 | 2.94% |
| Lysine LYS (K) | 19 | 9.31% |
| Methionine MET (M) | 6 | 2.94% |
| Leucine LEU (L) | 18 | 8.82% |
| Asparagine ASN (N) | 8 | 3.92% |
| Glutamine GLN (Q) | 5 | 2.45% |
| Proline PRO (P) | 5 | 2.45% |
| Serine SER (S) | 15 | 7.35% |
| Arginine ARG (R) | 4 | 1.96% |
| Threonine THR (T) | 15 | 7.35% |
| Tryptophan TRP (W) | 2 | 0.98% |
| Valine VAL (V) | 17 | 8.33% |
| Tyrosine TYR (Y) | 4 | 1.96% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 987 |
| Hydrogen | H | 1560 |
| Nitrogen | N | 262 |
| Oxygen | O | 290 |
| Sulphur | S | 7 |
| Formula | C987H1560N262O290S7 |
| Total Number of Atoms: | 3106 |
| Total number of positively charged residues (ARG + LYS): | 23 |
| Total number of negatively charged residues (ASP + GLU): | 19 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 16960 Absorption 0.1% (=1 g/l) 0.772, assuming all pairs of CYS residues form cystines Ext. coefficient 16960 Absorption 0.1% (=1 g/l) 0.772, assuming all CYS residues are reduced |
| Aromaticity: | 0.088 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 10.99 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.88, 26.96, 22.55] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.0882 |
| Grand average of hydropathicity (GRAVY): | -0.10 |