Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5371 |
| Number of amino acids: | 294 |
| Molecular Weight: | 32393.35 Da |
| Theoretical pI: | 8.98 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 18 | 6.12% |
| Cysteine CYS (C) | 7 | 2.38% |
| Glutamic Acid GLU (E) | 7 | 2.38% |
| Aspartic Acid ASP (D) | 13 | 4.42% |
| Glycine GLY (G) | 30 | 10.2% |
| Phynylalanine PHE (F) | 15 | 5.1% |
| Isoleucine ILE (I) | 19 | 6.46% |
| Histidine HIS (H) | 4 | 1.36% |
| Lysine LYS (K) | 18 | 6.12% |
| Methionine MET (M) | 5 | 1.7% |
| Leucine LEU (L) | 34 | 11.56% |
| Asparagine ASN (N) | 16 | 5.44% |
| Glutamine GLN (Q) | 17 | 5.78% |
| Proline PRO (P) | 14 | 4.76% |
| Serine SER (S) | 23 | 7.82% |
| Arginine ARG (R) | 9 | 3.06% |
| Threonine THR (T) | 11 | 3.74% |
| Tryptophan TRP (W) | 6 | 2.04% |
| Valine VAL (V) | 16 | 5.44% |
| Tyrosine TYR (Y) | 12 | 4.08% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1472 |
| Hydrogen | H | 2280 |
| Nitrogen | N | 386 |
| Oxygen | O | 414 |
| Sulphur | S | 12 |
| Formula | C1472H2280N386O414S12 |
| Total Number of Atoms: | 4564 |
| Total number of positively charged residues (ARG + LYS): | 27 |
| Total number of negatively charged residues (ASP + GLU): | 20 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 51255 Absorption 0.1% (=1 g/l) 1.582, assuming all pairs of CYS residues form cystines Ext. coefficient 50880 Absorption 0.1% (=1 g/l) 1.571, assuming all CYS residues are reduced |
| Aromaticity: | 0.112 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.91 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.69, 28.23, 21.77] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 92.2108 |
| Grand average of hydropathicity (GRAVY): | -0.02 |