Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5361 |
| Number of amino acids: | 331 |
| Molecular Weight: | 36890.81 Da |
| Theoretical pI: | 6.51 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 28 | 8.46% |
| Cysteine CYS (C) | 2 | 0.6% |
| Glutamic Acid GLU (E) | 15 | 4.53% |
| Aspartic Acid ASP (D) | 13 | 3.93% |
| Glycine GLY (G) | 21 | 6.34% |
| Phynylalanine PHE (F) | 17 | 5.14% |
| Isoleucine ILE (I) | 30 | 9.06% |
| Histidine HIS (H) | 4 | 1.21% |
| Lysine LYS (K) | 18 | 5.44% |
| Methionine MET (M) | 5 | 1.51% |
| Leucine LEU (L) | 26 | 7.85% |
| Asparagine ASN (N) | 32 | 9.67% |
| Glutamine GLN (Q) | 15 | 4.53% |
| Proline PRO (P) | 16 | 4.83% |
| Serine SER (S) | 26 | 7.85% |
| Arginine ARG (R) | 9 | 2.72% |
| Threonine THR (T) | 13 | 3.93% |
| Tryptophan TRP (W) | 2 | 0.6% |
| Valine VAL (V) | 18 | 5.44% |
| Tyrosine TYR (Y) | 21 | 6.34% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1673 |
| Hydrogen | H | 2567 |
| Nitrogen | N | 433 |
| Oxygen | O | 495 |
| Sulphur | S | 7 |
| Formula | C1673H2567N433O495S7 |
| Total Number of Atoms: | 5175 |
| Total number of positively charged residues (ARG + LYS): | 27 |
| Total number of negatively charged residues (ASP + GLU): | 28 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 42415 Absorption 0.1% (=1 g/l) 1.150, assuming all pairs of CYS residues form cystines Ext. coefficient 42290 Absorption 0.1% (=1 g/l) 1.146, assuming all CYS residues are reduced |
| Aromaticity: | 0.121 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.11 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.44, 28.70, 22.36] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 90.2115 |
| Grand average of hydropathicity (GRAVY): | -0.17 |