Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5332 |
| Number of amino acids: | 639 |
| Molecular Weight: | 74325.34 Da |
| Theoretical pI: | 5.47 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 28 | 4.38% |
| Cysteine CYS (C) | 5 | 0.78% |
| Glutamic Acid GLU (E) | 81 | 12.68% |
| Aspartic Acid ASP (D) | 29 | 4.54% |
| Glycine GLY (G) | 31 | 4.85% |
| Phynylalanine PHE (F) | 32 | 5.01% |
| Isoleucine ILE (I) | 29 | 4.54% |
| Histidine HIS (H) | 22 | 3.44% |
| Lysine LYS (K) | 42 | 6.57% |
| Methionine MET (M) | 6 | 0.94% |
| Leucine LEU (L) | 49 | 7.67% |
| Asparagine ASN (N) | 42 | 6.57% |
| Glutamine GLN (Q) | 54 | 8.45% |
| Proline PRO (P) | 35 | 5.48% |
| Serine SER (S) | 47 | 7.36% |
| Arginine ARG (R) | 43 | 6.73% |
| Threonine THR (T) | 14 | 2.19% |
| Tryptophan TRP (W) | 3 | 0.47% |
| Valine VAL (V) | 32 | 5.01% |
| Tyrosine TYR (Y) | 15 | 2.35% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3248 |
| Hydrogen | H | 5061 |
| Nitrogen | N | 953 |
| Oxygen | O | 1032 |
| Sulphur | S | 11 |
| Formula | C3248H5061N953O1032S11 |
| Total Number of Atoms: | 10305 |
| Total number of positively charged residues (ARG + LYS): | 85 |
| Total number of negatively charged residues (ASP + GLU): | 110 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 39100 Absorption 0.1% (=1 g/l) 0.526, assuming all pairs of CYS residues form cystines Ext. coefficient 38850 Absorption 0.1% (=1 g/l) 0.523, assuming all CYS residues are reduced |
| Aromaticity: | 0.078 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 67.76 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.04, 24.26, 25.67] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 66.5102 |
| Grand average of hydropathicity (GRAVY): | -1.05 |