Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5319 |
| Number of amino acids: | 290 |
| Molecular Weight: | 33141.4 Da |
| Theoretical pI: | 5.09 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 15 | 5.17% |
| Cysteine CYS (C) | 7 | 2.41% |
| Glutamic Acid GLU (E) | 19 | 6.55% |
| Aspartic Acid ASP (D) | 19 | 6.55% |
| Glycine GLY (G) | 19 | 6.55% |
| Phynylalanine PHE (F) | 17 | 5.86% |
| Isoleucine ILE (I) | 13 | 4.48% |
| Histidine HIS (H) | 10 | 3.45% |
| Lysine LYS (K) | 15 | 5.17% |
| Methionine MET (M) | 10 | 3.45% |
| Leucine LEU (L) | 19 | 6.55% |
| Asparagine ASN (N) | 14 | 4.83% |
| Glutamine GLN (Q) | 11 | 3.79% |
| Proline PRO (P) | 10 | 3.45% |
| Serine SER (S) | 21 | 7.24% |
| Arginine ARG (R) | 9 | 3.1% |
| Threonine THR (T) | 18 | 6.21% |
| Tryptophan TRP (W) | 9 | 3.1% |
| Valine VAL (V) | 24 | 8.28% |
| Tyrosine TYR (Y) | 11 | 3.79% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1488 |
| Hydrogen | H | 2228 |
| Nitrogen | N | 386 |
| Oxygen | O | 442 |
| Sulphur | S | 17 |
| Formula | C1488H2228N386O442S17 |
| Total Number of Atoms: | 4561 |
| Total number of positively charged residues (ARG + LYS): | 24 |
| Total number of negatively charged residues (ASP + GLU): | 38 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 66265 Absorption 0.1% (=1 g/l) 1.999, assuming all pairs of CYS residues form cystines Ext. coefficient 65890 Absorption 0.1% (=1 g/l) 1.988, assuming all CYS residues are reduced |
| Aromaticity: | 0.128 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 31.50 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.07, 22.07, 21.72] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 72.2069 |
| Grand average of hydropathicity (GRAVY): | -0.29 |