Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5318 |
| Number of amino acids: | 679 |
| Molecular Weight: | 75719.99 Da |
| Theoretical pI: | 6.88 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 48 | 7.07% |
| Cysteine CYS (C) | 18 | 2.65% |
| Glutamic Acid GLU (E) | 40 | 5.89% |
| Aspartic Acid ASP (D) | 36 | 5.3% |
| Glycine GLY (G) | 52 | 7.66% |
| Phynylalanine PHE (F) | 42 | 6.19% |
| Isoleucine ILE (I) | 39 | 5.74% |
| Histidine HIS (H) | 10 | 1.47% |
| Lysine LYS (K) | 30 | 4.42% |
| Methionine MET (M) | 10 | 1.47% |
| Leucine LEU (L) | 65 | 9.57% |
| Asparagine ASN (N) | 35 | 5.15% |
| Glutamine GLN (Q) | 23 | 3.39% |
| Proline PRO (P) | 25 | 3.68% |
| Serine SER (S) | 60 | 8.84% |
| Arginine ARG (R) | 45 | 6.63% |
| Threonine THR (T) | 35 | 5.15% |
| Tryptophan TRP (W) | 8 | 1.18% |
| Valine VAL (V) | 38 | 5.6% |
| Tyrosine TYR (Y) | 20 | 2.95% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3366 |
| Hydrogen | H | 5246 |
| Nitrogen | N | 930 |
| Oxygen | O | 1005 |
| Sulphur | S | 28 |
| Formula | C3366H5246N930O1005S28 |
| Total Number of Atoms: | 10575 |
| Total number of positively charged residues (ARG + LYS): | 75 |
| Total number of negatively charged residues (ASP + GLU): | 76 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 74925 Absorption 0.1% (=1 g/l) 0.990, assuming all pairs of CYS residues form cystines Ext. coefficient 73800 Absorption 0.1% (=1 g/l) 0.975, assuming all CYS residues are reduced |
| Aromaticity: | 0.103 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.60 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.22, 25.33, 24.01] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.0339 |
| Grand average of hydropathicity (GRAVY): | -0.20 |