Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5314 |
| Number of amino acids: | 516 |
| Molecular Weight: | 58709.38 Da |
| Theoretical pI: | 8.21 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 6.4% |
| Cysteine CYS (C) | 7 | 1.36% |
| Glutamic Acid GLU (E) | 47 | 9.11% |
| Aspartic Acid ASP (D) | 17 | 3.29% |
| Glycine GLY (G) | 46 | 8.91% |
| Phynylalanine PHE (F) | 24 | 4.65% |
| Isoleucine ILE (I) | 21 | 4.07% |
| Histidine HIS (H) | 15 | 2.91% |
| Lysine LYS (K) | 14 | 2.71% |
| Methionine MET (M) | 7 | 1.36% |
| Leucine LEU (L) | 37 | 7.17% |
| Asparagine ASN (N) | 31 | 6.01% |
| Glutamine GLN (Q) | 50 | 9.69% |
| Proline PRO (P) | 22 | 4.26% |
| Serine SER (S) | 33 | 6.4% |
| Arginine ARG (R) | 52 | 10.08% |
| Threonine THR (T) | 14 | 2.71% |
| Tryptophan TRP (W) | 7 | 1.36% |
| Valine VAL (V) | 32 | 6.2% |
| Tyrosine TYR (Y) | 7 | 1.36% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2539 |
| Hydrogen | H | 3992 |
| Nitrogen | N | 804 |
| Oxygen | O | 780 |
| Sulphur | S | 14 |
| Formula | C2539H3992N804O780S14 |
| Total Number of Atoms: | 8129 |
| Total number of positively charged residues (ARG + LYS): | 66 |
| Total number of negatively charged residues (ASP + GLU): | 64 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 49305 Absorption 0.1% (=1 g/l) 0.840, assuming all pairs of CYS residues form cystines Ext. coefficient 48930 Absorption 0.1% (=1 g/l) 0.833, assuming all CYS residues are reduced |
| Aromaticity: | 0.074 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 53.64 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.81, 25.58, 24.03] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 68.2171 |
| Grand average of hydropathicity (GRAVY): | -0.82 |