Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5304 |
| Number of amino acids: | 117 |
| Molecular Weight: | 12455.96 Da |
| Theoretical pI: | 4.94 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 17 | 14.53% |
| Cysteine CYS (C) | 0 | 0% |
| Glutamic Acid GLU (E) | 10 | 8.55% |
| Aspartic Acid ASP (D) | 6 | 5.13% |
| Glycine GLY (G) | 10 | 8.55% |
| Phynylalanine PHE (F) | 2 | 1.71% |
| Isoleucine ILE (I) | 3 | 2.56% |
| Histidine HIS (H) | 2 | 1.71% |
| Lysine LYS (K) | 3 | 2.56% |
| Methionine MET (M) | 2 | 1.71% |
| Leucine LEU (L) | 8 | 6.84% |
| Asparagine ASN (N) | 3 | 2.56% |
| Glutamine GLN (Q) | 3 | 2.56% |
| Proline PRO (P) | 4 | 3.42% |
| Serine SER (S) | 8 | 6.84% |
| Arginine ARG (R) | 8 | 6.84% |
| Threonine THR (T) | 7 | 5.98% |
| Tryptophan TRP (W) | 2 | 1.71% |
| Valine VAL (V) | 16 | 13.68% |
| Tyrosine TYR (Y) | 3 | 2.56% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 545 |
| Hydrogen | H | 870 |
| Nitrogen | N | 156 |
| Oxygen | O | 174 |
| Sulphur | S | 2 |
| Formula | C545H870N156O174S2 |
| Total Number of Atoms: | 1747 |
| Total number of positively charged residues (ARG + LYS): | 11 |
| Total number of negatively charged residues (ASP + GLU): | 16 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 15470 Absorption 0.1% (=1 g/l) 1.242 |
| Aromaticity: | 0.060 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 25.07 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.06, 21.37, 31.62] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 90.8546 |
| Grand average of hydropathicity (GRAVY): | -0.06 |