Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5254 |
| Number of amino acids: | 651 |
| Molecular Weight: | 72706.06 Da |
| Theoretical pI: | 8.39 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 34 | 5.22% |
| Cysteine CYS (C) | 19 | 2.92% |
| Glutamic Acid GLU (E) | 36 | 5.53% |
| Aspartic Acid ASP (D) | 31 | 4.76% |
| Glycine GLY (G) | 42 | 6.45% |
| Phynylalanine PHE (F) | 36 | 5.53% |
| Isoleucine ILE (I) | 29 | 4.45% |
| Histidine HIS (H) | 15 | 2.3% |
| Lysine LYS (K) | 35 | 5.38% |
| Methionine MET (M) | 10 | 1.54% |
| Leucine LEU (L) | 70 | 10.75% |
| Asparagine ASN (N) | 27 | 4.15% |
| Glutamine GLN (Q) | 18 | 2.76% |
| Proline PRO (P) | 22 | 3.38% |
| Serine SER (S) | 64 | 9.83% |
| Arginine ARG (R) | 38 | 5.84% |
| Threonine THR (T) | 50 | 7.68% |
| Tryptophan TRP (W) | 4 | 0.61% |
| Valine VAL (V) | 48 | 7.37% |
| Tyrosine TYR (Y) | 23 | 3.53% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3234 |
| Hydrogen | H | 5093 |
| Nitrogen | N | 879 |
| Oxygen | O | 968 |
| Sulphur | S | 29 |
| Formula | C3234H5093N879O968S29 |
| Total Number of Atoms: | 10203 |
| Total number of positively charged residues (ARG + LYS): | 73 |
| Total number of negatively charged residues (ASP + GLU): | 67 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 57395 Absorption 0.1% (=1 g/l) 0.789, assuming all pairs of CYS residues form cystines Ext. coefficient 56270 Absorption 0.1% (=1 g/l) 0.774, assuming all CYS residues are reduced |
| Aromaticity: | 0.097 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.52 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.26, 23.81, 23.04] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 85.914 |
| Grand average of hydropathicity (GRAVY): | -0.14 |