Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5253 |
| Number of amino acids: | 145 |
| Molecular Weight: | 15499.73 Da |
| Theoretical pI: | 5.88 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 15 | 10.34% |
| Cysteine CYS (C) | 10 | 6.9% |
| Glutamic Acid GLU (E) | 7 | 4.83% |
| Aspartic Acid ASP (D) | 7 | 4.83% |
| Glycine GLY (G) | 11 | 7.59% |
| Phynylalanine PHE (F) | 3 | 2.07% |
| Isoleucine ILE (I) | 4 | 2.76% |
| Histidine HIS (H) | 3 | 2.07% |
| Lysine LYS (K) | 5 | 3.45% |
| Methionine MET (M) | 2 | 1.38% |
| Leucine LEU (L) | 13 | 8.97% |
| Asparagine ASN (N) | 3 | 2.07% |
| Glutamine GLN (Q) | 7 | 4.83% |
| Proline PRO (P) | 13 | 8.97% |
| Serine SER (S) | 10 | 6.9% |
| Arginine ARG (R) | 7 | 4.83% |
| Threonine THR (T) | 8 | 5.52% |
| Tryptophan TRP (W) | 1 | 0.69% |
| Valine VAL (V) | 11 | 7.59% |
| Tyrosine TYR (Y) | 5 | 3.45% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 674 |
| Hydrogen | H | 1066 |
| Nitrogen | N | 188 |
| Oxygen | O | 207 |
| Sulphur | S | 12 |
| Formula | C674H1066N188O207S12 |
| Total Number of Atoms: | 2147 |
| Total number of positively charged residues (ARG + LYS): | 12 |
| Total number of negatively charged residues (ASP + GLU): | 14 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 13575 Absorption 0.1% (=1 g/l) 0.876, assuming all pairs of CYS residues form cystines Ext. coefficient 12950 Absorption 0.1% (=1 g/l) 0.835, assuming all CYS residues are reduced |
| Aromaticity: | 0.062 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 39.16 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.52, 25.52, 25.52] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 78.069 |
| Grand average of hydropathicity (GRAVY): | -0.09 |