Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5249 |
| Number of amino acids: | 273 |
| Molecular Weight: | 29420.82 Da |
| Theoretical pI: | 4.65 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 18 | 6.59% |
| Cysteine CYS (C) | 0 | 0% |
| Glutamic Acid GLU (E) | 10 | 3.66% |
| Aspartic Acid ASP (D) | 16 | 5.86% |
| Glycine GLY (G) | 20 | 7.33% |
| Phynylalanine PHE (F) | 18 | 6.59% |
| Isoleucine ILE (I) | 12 | 4.4% |
| Histidine HIS (H) | 4 | 1.47% |
| Lysine LYS (K) | 10 | 3.66% |
| Methionine MET (M) | 1 | 0.37% |
| Leucine LEU (L) | 31 | 11.36% |
| Asparagine ASN (N) | 23 | 8.42% |
| Glutamine GLN (Q) | 6 | 2.2% |
| Proline PRO (P) | 10 | 3.66% |
| Serine SER (S) | 33 | 12.09% |
| Arginine ARG (R) | 5 | 1.83% |
| Threonine THR (T) | 24 | 8.79% |
| Tryptophan TRP (W) | 5 | 1.83% |
| Valine VAL (V) | 22 | 8.06% |
| Tyrosine TYR (Y) | 5 | 1.83% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1324 |
| Hydrogen | H | 2036 |
| Nitrogen | N | 340 |
| Oxygen | O | 417 |
| Sulphur | S | 1 |
| Formula | C1324H2036N340O417S1 |
| Total Number of Atoms: | 4118 |
| Total number of positively charged residues (ARG + LYS): | 15 |
| Total number of negatively charged residues (ASP + GLU): | 26 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 34950 Absorption 0.1% (=1 g/l) 1.188 |
| Aromaticity: | 0.103 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 22.39 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.07, 31.50, 21.98] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 91.3919 |
| Grand average of hydropathicity (GRAVY): | 0.01 |