Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5246 |
| Number of amino acids: | 615 |
| Molecular Weight: | 69176.14 Da |
| Theoretical pI: | 7 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 38 | 6.18% |
| Cysteine CYS (C) | 16 | 2.6% |
| Glutamic Acid GLU (E) | 38 | 6.18% |
| Aspartic Acid ASP (D) | 34 | 5.53% |
| Glycine GLY (G) | 37 | 6.02% |
| Phynylalanine PHE (F) | 39 | 6.34% |
| Isoleucine ILE (I) | 36 | 5.85% |
| Histidine HIS (H) | 15 | 2.44% |
| Lysine LYS (K) | 35 | 5.69% |
| Methionine MET (M) | 9 | 1.46% |
| Leucine LEU (L) | 65 | 10.57% |
| Asparagine ASN (N) | 26 | 4.23% |
| Glutamine GLN (Q) | 20 | 3.25% |
| Proline PRO (P) | 18 | 2.93% |
| Serine SER (S) | 59 | 9.59% |
| Arginine ARG (R) | 36 | 5.85% |
| Threonine THR (T) | 29 | 4.72% |
| Tryptophan TRP (W) | 7 | 1.14% |
| Valine VAL (V) | 43 | 6.99% |
| Tyrosine TYR (Y) | 15 | 2.44% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3094 |
| Hydrogen | H | 4851 |
| Nitrogen | N | 841 |
| Oxygen | O | 909 |
| Sulphur | S | 25 |
| Formula | C3094H4851N841O909S25 |
| Total Number of Atoms: | 9720 |
| Total number of positively charged residues (ARG + LYS): | 71 |
| Total number of negatively charged residues (ASP + GLU): | 72 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 61850 Absorption 0.1% (=1 g/l) 0.894, assuming all pairs of CYS residues form cystines Ext. coefficient 60850 Absorption 0.1% (=1 g/l) 0.880, assuming all CYS residues are reduced |
| Aromaticity: | 0.099 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.64 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.33, 22.76, 24.39] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 90.504 |
| Grand average of hydropathicity (GRAVY): | -0.12 |