Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5228 |
| Number of amino acids: | 222 |
| Molecular Weight: | 24051.06 Da |
| Theoretical pI: | 9.29 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 16 | 7.21% |
| Cysteine CYS (C) | 4 | 1.8% |
| Glutamic Acid GLU (E) | 4 | 1.8% |
| Aspartic Acid ASP (D) | 9 | 4.05% |
| Glycine GLY (G) | 21 | 9.46% |
| Phynylalanine PHE (F) | 17 | 7.66% |
| Isoleucine ILE (I) | 13 | 5.86% |
| Histidine HIS (H) | 4 | 1.8% |
| Lysine LYS (K) | 17 | 7.66% |
| Methionine MET (M) | 3 | 1.35% |
| Leucine LEU (L) | 20 | 9.01% |
| Asparagine ASN (N) | 14 | 6.31% |
| Glutamine GLN (Q) | 4 | 1.8% |
| Proline PRO (P) | 15 | 6.76% |
| Serine SER (S) | 11 | 4.95% |
| Arginine ARG (R) | 4 | 1.8% |
| Threonine THR (T) | 13 | 5.86% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 23 | 10.36% |
| Tyrosine TYR (Y) | 10 | 4.5% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1115 |
| Hydrogen | H | 1725 |
| Nitrogen | N | 277 |
| Oxygen | O | 301 |
| Sulphur | S | 7 |
| Formula | C1115H1725N277O301S7 |
| Total Number of Atoms: | 3425 |
| Total number of positively charged residues (ARG + LYS): | 21 |
| Total number of negatively charged residues (ASP + GLU): | 13 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 15150 Absorption 0.1% (=1 g/l) 0.630, assuming all pairs of CYS residues form cystines Ext. coefficient 14900 Absorption 0.1% (=1 g/l) 0.620, assuming all CYS residues are reduced |
| Aromaticity: | 0.122 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 15.20 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [37.39, 27.48, 19.37] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 95.2254 |
| Grand average of hydropathicity (GRAVY): | 0.24 |