Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5226 |
| Number of amino acids: | 229 |
| Molecular Weight: | 24736.35 Da |
| Theoretical pI: | 6.46 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 18 | 7.86% |
| Cysteine CYS (C) | 3 | 1.31% |
| Glutamic Acid GLU (E) | 6 | 2.62% |
| Aspartic Acid ASP (D) | 13 | 5.68% |
| Glycine GLY (G) | 19 | 8.3% |
| Phynylalanine PHE (F) | 18 | 7.86% |
| Isoleucine ILE (I) | 12 | 5.24% |
| Histidine HIS (H) | 4 | 1.75% |
| Lysine LYS (K) | 10 | 4.37% |
| Methionine MET (M) | 3 | 1.31% |
| Leucine LEU (L) | 19 | 8.3% |
| Asparagine ASN (N) | 17 | 7.42% |
| Glutamine GLN (Q) | 6 | 2.62% |
| Proline PRO (P) | 13 | 5.68% |
| Serine SER (S) | 15 | 6.55% |
| Arginine ARG (R) | 8 | 3.49% |
| Threonine THR (T) | 11 | 4.8% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 28 | 12.23% |
| Tyrosine TYR (Y) | 6 | 2.62% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1124 |
| Hydrogen | H | 1744 |
| Nitrogen | N | 294 |
| Oxygen | O | 323 |
| Sulphur | S | 6 |
| Formula | C1124H1744N294O323S6 |
| Total Number of Atoms: | 3491 |
| Total number of positively charged residues (ARG + LYS): | 18 |
| Total number of negatively charged residues (ASP + GLU): | 19 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 9065 Absorption 0.1% (=1 g/l) 0.366, assuming all pairs of CYS residues form cystines Ext. coefficient 8940 Absorption 0.1% (=1 g/l) 0.361, assuming all CYS residues are reduced |
| Aromaticity: | 0.105 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 27.19 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [36.24, 27.95, 20.09] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 96.1136 |
| Grand average of hydropathicity (GRAVY): | 0.21 |