Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5224 |
| Number of amino acids: | 674 |
| Molecular Weight: | 73353.18 Da |
| Theoretical pI: | 5.87 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 4.9% |
| Cysteine CYS (C) | 13 | 1.93% |
| Glutamic Acid GLU (E) | 49 | 7.27% |
| Aspartic Acid ASP (D) | 28 | 4.15% |
| Glycine GLY (G) | 63 | 9.35% |
| Phynylalanine PHE (F) | 28 | 4.15% |
| Isoleucine ILE (I) | 28 | 4.15% |
| Histidine HIS (H) | 14 | 2.08% |
| Lysine LYS (K) | 39 | 5.79% |
| Methionine MET (M) | 14 | 2.08% |
| Leucine LEU (L) | 98 | 14.54% |
| Asparagine ASN (N) | 34 | 5.04% |
| Glutamine GLN (Q) | 16 | 2.37% |
| Proline PRO (P) | 34 | 5.04% |
| Serine SER (S) | 72 | 10.68% |
| Arginine ARG (R) | 28 | 4.15% |
| Threonine THR (T) | 21 | 3.12% |
| Tryptophan TRP (W) | 6 | 0.89% |
| Valine VAL (V) | 45 | 6.68% |
| Tyrosine TYR (Y) | 11 | 1.63% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3261 |
| Hydrogen | H | 5211 |
| Nitrogen | N | 881 |
| Oxygen | O | 983 |
| Sulphur | S | 27 |
| Formula | C3261H5211N881O983S27 |
| Total Number of Atoms: | 10363 |
| Total number of positively charged residues (ARG + LYS): | 67 |
| Total number of negatively charged residues (ASP + GLU): | 77 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 50140 Absorption 0.1% (=1 g/l) 0.684, assuming all pairs of CYS residues form cystines Ext. coefficient 49390 Absorption 0.1% (=1 g/l) 0.673, assuming all CYS residues are reduced |
| Aromaticity: | 0.067 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 45.33 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.05, 30.12, 28.78] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 97.1663 |
| Grand average of hydropathicity (GRAVY): | -0.08 |