Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5216 |
| Number of amino acids: | 289 |
| Molecular Weight: | 31676.25 Da |
| Theoretical pI: | 7.93 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 31 | 10.73% |
| Cysteine CYS (C) | 1 | 0.35% |
| Glutamic Acid GLU (E) | 11 | 3.81% |
| Aspartic Acid ASP (D) | 12 | 4.15% |
| Glycine GLY (G) | 14 | 4.84% |
| Phynylalanine PHE (F) | 12 | 4.15% |
| Isoleucine ILE (I) | 22 | 7.61% |
| Histidine HIS (H) | 1 | 0.35% |
| Lysine LYS (K) | 10 | 3.46% |
| Methionine MET (M) | 7 | 2.42% |
| Leucine LEU (L) | 32 | 11.07% |
| Asparagine ASN (N) | 19 | 6.57% |
| Glutamine GLN (Q) | 11 | 3.81% |
| Proline PRO (P) | 10 | 3.46% |
| Serine SER (S) | 29 | 10.03% |
| Arginine ARG (R) | 14 | 4.84% |
| Threonine THR (T) | 20 | 6.92% |
| Tryptophan TRP (W) | 1 | 0.35% |
| Valine VAL (V) | 18 | 6.23% |
| Tyrosine TYR (Y) | 14 | 4.84% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1419 |
| Hydrogen | H | 2256 |
| Nitrogen | N | 374 |
| Oxygen | O | 429 |
| Sulphur | S | 8 |
| Formula | C1419H2256N374O429S8 |
| Total Number of Atoms: | 4486 |
| Total number of positively charged residues (ARG + LYS): | 24 |
| Total number of negatively charged residues (ASP + GLU): | 23 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 26360 Absorption 0.1% (=1 g/l) 0.832, assuming all pairs of CYS residues form cystines Ext. coefficient 26360 Absorption 0.1% (=1 g/l) 0.832, assuming all CYS residues are reduced |
| Aromaticity: | 0.093 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 34.49 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.26, 24.91, 28.03] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 101.661 |
| Grand average of hydropathicity (GRAVY): | 0.11 |