Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5210 |
| Number of amino acids: | 440 |
| Molecular Weight: | 49455.08 Da |
| Theoretical pI: | 8.16 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 36 | 8.18% |
| Cysteine CYS (C) | 6 | 1.36% |
| Glutamic Acid GLU (E) | 18 | 4.09% |
| Aspartic Acid ASP (D) | 23 | 5.23% |
| Glycine GLY (G) | 36 | 8.18% |
| Phynylalanine PHE (F) | 13 | 2.95% |
| Isoleucine ILE (I) | 20 | 4.55% |
| Histidine HIS (H) | 10 | 2.27% |
| Lysine LYS (K) | 11 | 2.5% |
| Methionine MET (M) | 9 | 2.05% |
| Leucine LEU (L) | 45 | 10.23% |
| Asparagine ASN (N) | 20 | 4.55% |
| Glutamine GLN (Q) | 16 | 3.64% |
| Proline PRO (P) | 23 | 5.23% |
| Serine SER (S) | 37 | 8.41% |
| Arginine ARG (R) | 32 | 7.27% |
| Threonine THR (T) | 18 | 4.09% |
| Tryptophan TRP (W) | 14 | 3.18% |
| Valine VAL (V) | 29 | 6.59% |
| Tyrosine TYR (Y) | 24 | 5.45% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2223 |
| Hydrogen | H | 3397 |
| Nitrogen | N | 617 |
| Oxygen | O | 638 |
| Sulphur | S | 15 |
| Formula | C2223H3397N617O638S15 |
| Total Number of Atoms: | 6890 |
| Total number of positively charged residues (ARG + LYS): | 43 |
| Total number of negatively charged residues (ASP + GLU): | 41 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 113135 Absorption 0.1% (=1 g/l) 2.288, assuming all pairs of CYS residues form cystines Ext. coefficient 112760 Absorption 0.1% (=1 g/l) 2.280, assuming all CYS residues are reduced |
| Aromaticity: | 0.116 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.77 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.95, 26.36, 24.55] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 84.9092 |
| Grand average of hydropathicity (GRAVY): | -0.25 |