Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5209 |
| Number of amino acids: | 303 |
| Molecular Weight: | 32208.57 Da |
| Theoretical pI: | 4.23 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 21 | 6.93% |
| Cysteine CYS (C) | 15 | 4.95% |
| Glutamic Acid GLU (E) | 12 | 3.96% |
| Aspartic Acid ASP (D) | 21 | 6.93% |
| Glycine GLY (G) | 53 | 17.49% |
| Phynylalanine PHE (F) | 15 | 4.95% |
| Isoleucine ILE (I) | 11 | 3.63% |
| Histidine HIS (H) | 3 | 0.99% |
| Lysine LYS (K) | 7 | 2.31% |
| Methionine MET (M) | 7 | 2.31% |
| Leucine LEU (L) | 21 | 6.93% |
| Asparagine ASN (N) | 14 | 4.62% |
| Glutamine GLN (Q) | 14 | 4.62% |
| Proline PRO (P) | 16 | 5.28% |
| Serine SER (S) | 19 | 6.27% |
| Arginine ARG (R) | 7 | 2.31% |
| Threonine THR (T) | 16 | 5.28% |
| Tryptophan TRP (W) | 8 | 2.64% |
| Valine VAL (V) | 7 | 2.31% |
| Tyrosine TYR (Y) | 16 | 5.28% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1416 |
| Hydrogen | H | 2071 |
| Nitrogen | N | 373 |
| Oxygen | O | 449 |
| Sulphur | S | 22 |
| Formula | C1416H2071N373O449S22 |
| Total Number of Atoms: | 4331 |
| Total number of positively charged residues (ARG + LYS): | 14 |
| Total number of negatively charged residues (ASP + GLU): | 33 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 68715 Absorption 0.1% (=1 g/l) 2.133, assuming all pairs of CYS residues form cystines Ext. coefficient 67840 Absorption 0.1% (=1 g/l) 2.106, assuming all CYS residues are reduced |
| Aromaticity: | 0.129 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 49.50 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.74, 33.66, 20.13] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 54.8185 |
| Grand average of hydropathicity (GRAVY): | -0.31 |