Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5195 |
| Number of amino acids: | 265 |
| Molecular Weight: | 27500.19 Da |
| Theoretical pI: | 10.02 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 14 | 5.28% |
| Cysteine CYS (C) | 1 | 0.38% |
| Glutamic Acid GLU (E) | 10 | 3.77% |
| Aspartic Acid ASP (D) | 13 | 4.91% |
| Glycine GLY (G) | 29 | 10.94% |
| Phynylalanine PHE (F) | 2 | 0.75% |
| Isoleucine ILE (I) | 9 | 3.4% |
| Histidine HIS (H) | 0 | 0% |
| Lysine LYS (K) | 32 | 12.08% |
| Methionine MET (M) | 2 | 0.75% |
| Leucine LEU (L) | 18 | 6.79% |
| Asparagine ASN (N) | 3 | 1.13% |
| Glutamine GLN (Q) | 2 | 0.75% |
| Proline PRO (P) | 1 | 0.38% |
| Serine SER (S) | 84 | 31.7% |
| Arginine ARG (R) | 16 | 6.04% |
| Threonine THR (T) | 6 | 2.26% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 10 | 3.77% |
| Tyrosine TYR (Y) | 13 | 4.91% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1153 |
| Hydrogen | H | 1918 |
| Nitrogen | N | 350 |
| Oxygen | O | 420 |
| Sulphur | S | 3 |
| Formula | C1153H1918N350O420S3 |
| Total Number of Atoms: | 3844 |
| Total number of positively charged residues (ARG + LYS): | 48 |
| Total number of negatively charged residues (ASP + GLU): | 23 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 19370 Absorption 0.1% (=1 g/l) 0.704, assuming all pairs of CYS residues form cystines Ext. coefficient 19370 Absorption 0.1% (=1 g/l) 0.704, assuming all CYS residues are reduced |
| Aromaticity: | 0.057 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 61.45 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [19.62, 44.15, 16.60] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 55.9623 |
| Grand average of hydropathicity (GRAVY): | -0.79 |