Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5189 |
| Number of amino acids: | 437 |
| Molecular Weight: | 49504.58 Da |
| Theoretical pI: | 6.4 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 20 | 4.58% |
| Cysteine CYS (C) | 8 | 1.83% |
| Glutamic Acid GLU (E) | 25 | 5.72% |
| Aspartic Acid ASP (D) | 19 | 4.35% |
| Glycine GLY (G) | 31 | 7.09% |
| Phynylalanine PHE (F) | 18 | 4.12% |
| Isoleucine ILE (I) | 30 | 6.86% |
| Histidine HIS (H) | 10 | 2.29% |
| Lysine LYS (K) | 27 | 6.18% |
| Methionine MET (M) | 8 | 1.83% |
| Leucine LEU (L) | 44 | 10.07% |
| Asparagine ASN (N) | 23 | 5.26% |
| Glutamine GLN (Q) | 12 | 2.75% |
| Proline PRO (P) | 25 | 5.72% |
| Serine SER (S) | 40 | 9.15% |
| Arginine ARG (R) | 14 | 3.2% |
| Threonine THR (T) | 21 | 4.81% |
| Tryptophan TRP (W) | 11 | 2.52% |
| Valine VAL (V) | 25 | 5.72% |
| Tyrosine TYR (Y) | 26 | 5.95% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2260 |
| Hydrogen | H | 3440 |
| Nitrogen | N | 572 |
| Oxygen | O | 648 |
| Sulphur | S | 16 |
| Formula | C2260H3440N572O648S16 |
| Total Number of Atoms: | 6936 |
| Total number of positively charged residues (ARG + LYS): | 41 |
| Total number of negatively charged residues (ASP + GLU): | 44 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 99740 Absorption 0.1% (=1 g/l) 2.015, assuming all pairs of CYS residues form cystines Ext. coefficient 99240 Absorption 0.1% (=1 g/l) 2.005, assuming all CYS residues are reduced |
| Aromaticity: | 0.126 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.47 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [35.24, 27.23, 22.20] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 87.208 |
| Grand average of hydropathicity (GRAVY): | -0.21 |