Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5179 |
| Number of amino acids: | 732 |
| Molecular Weight: | 81443.51 Da |
| Theoretical pI: | 8.49 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 47 | 6.42% |
| Cysteine CYS (C) | 12 | 1.64% |
| Glutamic Acid GLU (E) | 32 | 4.37% |
| Aspartic Acid ASP (D) | 33 | 4.51% |
| Glycine GLY (G) | 73 | 9.97% |
| Phynylalanine PHE (F) | 34 | 4.64% |
| Isoleucine ILE (I) | 37 | 5.05% |
| Histidine HIS (H) | 20 | 2.73% |
| Lysine LYS (K) | 43 | 5.87% |
| Methionine MET (M) | 15 | 2.05% |
| Leucine LEU (L) | 52 | 7.1% |
| Asparagine ASN (N) | 36 | 4.92% |
| Glutamine GLN (Q) | 23 | 3.14% |
| Proline PRO (P) | 36 | 4.92% |
| Serine SER (S) | 51 | 6.97% |
| Arginine ARG (R) | 28 | 3.83% |
| Threonine THR (T) | 48 | 6.56% |
| Tryptophan TRP (W) | 21 | 2.87% |
| Valine VAL (V) | 55 | 7.51% |
| Tyrosine TYR (Y) | 36 | 4.92% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3690 |
| Hydrogen | H | 5589 |
| Nitrogen | N | 979 |
| Oxygen | O | 1057 |
| Sulphur | S | 27 |
| Formula | C3690H5589N979O1057S27 |
| Total Number of Atoms: | 11342 |
| Total number of positively charged residues (ARG + LYS): | 71 |
| Total number of negatively charged residues (ASP + GLU): | 65 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 169890 Absorption 0.1% (=1 g/l) 2.086, assuming all pairs of CYS residues form cystines Ext. coefficient 169140 Absorption 0.1% (=1 g/l) 2.077, assuming all CYS residues are reduced |
| Aromaticity: | 0.124 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.25 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.10, 26.78, 19.95] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.6284 |
| Grand average of hydropathicity (GRAVY): | -0.25 |