Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5177 |
| Number of amino acids: | 504 |
| Molecular Weight: | 57043.49 Da |
| Theoretical pI: | 6.13 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 22 | 4.37% |
| Cysteine CYS (C) | 6 | 1.19% |
| Glutamic Acid GLU (E) | 42 | 8.33% |
| Aspartic Acid ASP (D) | 27 | 5.36% |
| Glycine GLY (G) | 43 | 8.53% |
| Phynylalanine PHE (F) | 24 | 4.76% |
| Isoleucine ILE (I) | 24 | 4.76% |
| Histidine HIS (H) | 12 | 2.38% |
| Lysine LYS (K) | 16 | 3.17% |
| Methionine MET (M) | 2 | 0.4% |
| Leucine LEU (L) | 38 | 7.54% |
| Asparagine ASN (N) | 23 | 4.56% |
| Glutamine GLN (Q) | 38 | 7.54% |
| Proline PRO (P) | 21 | 4.17% |
| Serine SER (S) | 43 | 8.53% |
| Arginine ARG (R) | 47 | 9.33% |
| Threonine THR (T) | 19 | 3.77% |
| Tryptophan TRP (W) | 6 | 1.19% |
| Valine VAL (V) | 41 | 8.13% |
| Tyrosine TYR (Y) | 10 | 1.98% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2489 |
| Hydrogen | H | 3912 |
| Nitrogen | N | 752 |
| Oxygen | O | 776 |
| Sulphur | S | 8 |
| Formula | C2489H3912N752O776S8 |
| Total Number of Atoms: | 7937 |
| Total number of positively charged residues (ARG + LYS): | 63 |
| Total number of negatively charged residues (ASP + GLU): | 69 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 48275 Absorption 0.1% (=1 g/l) 0.846, assuming all pairs of CYS residues form cystines Ext. coefficient 47900 Absorption 0.1% (=1 g/l) 0.840, assuming all CYS residues are reduced |
| Aromaticity: | 0.079 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 49.18 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.37, 25.79, 20.63] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.9325 |
| Grand average of hydropathicity (GRAVY): | -0.66 |