Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5176 |
| Number of amino acids: | 260 |
| Molecular Weight: | 27797.56 Da |
| Theoretical pI: | 8.92 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 23 | 8.85% |
| Cysteine CYS (C) | 8 | 3.08% |
| Glutamic Acid GLU (E) | 3 | 1.15% |
| Aspartic Acid ASP (D) | 6 | 2.31% |
| Glycine GLY (G) | 33 | 12.69% |
| Phynylalanine PHE (F) | 11 | 4.23% |
| Isoleucine ILE (I) | 11 | 4.23% |
| Histidine HIS (H) | 3 | 1.15% |
| Lysine LYS (K) | 8 | 3.08% |
| Methionine MET (M) | 6 | 2.31% |
| Leucine LEU (L) | 18 | 6.92% |
| Asparagine ASN (N) | 14 | 5.38% |
| Glutamine GLN (Q) | 14 | 5.38% |
| Proline PRO (P) | 14 | 5.38% |
| Serine SER (S) | 23 | 8.85% |
| Arginine ARG (R) | 7 | 2.69% |
| Threonine THR (T) | 20 | 7.69% |
| Tryptophan TRP (W) | 11 | 4.23% |
| Valine VAL (V) | 17 | 6.54% |
| Tyrosine TYR (Y) | 10 | 3.85% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1250 |
| Hydrogen | H | 1882 |
| Nitrogen | N | 334 |
| Oxygen | O | 360 |
| Sulphur | S | 14 |
| Formula | C1250H1882N334O360S14 |
| Total Number of Atoms: | 3840 |
| Total number of positively charged residues (ARG + LYS): | 15 |
| Total number of negatively charged residues (ASP + GLU): | 9 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 75900 Absorption 0.1% (=1 g/l) 2.730, assuming all pairs of CYS residues form cystines Ext. coefficient 75400 Absorption 0.1% (=1 g/l) 2.712, assuming all CYS residues are reduced |
| Aromaticity: | 0.123 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 39.66 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.00, 32.31, 19.23] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 71.3077 |
| Grand average of hydropathicity (GRAVY): | 0.00 |