Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5173 |
| Number of amino acids: | 658 |
| Molecular Weight: | 73937.62 Da |
| Theoretical pI: | 6.19 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 38 | 5.78% |
| Cysteine CYS (C) | 17 | 2.58% |
| Glutamic Acid GLU (E) | 36 | 5.47% |
| Aspartic Acid ASP (D) | 33 | 5.02% |
| Glycine GLY (G) | 42 | 6.38% |
| Phynylalanine PHE (F) | 38 | 5.78% |
| Isoleucine ILE (I) | 51 | 7.75% |
| Histidine HIS (H) | 11 | 1.67% |
| Lysine LYS (K) | 25 | 3.8% |
| Methionine MET (M) | 12 | 1.82% |
| Leucine LEU (L) | 59 | 8.97% |
| Asparagine ASN (N) | 34 | 5.17% |
| Glutamine GLN (Q) | 25 | 3.8% |
| Proline PRO (P) | 32 | 4.86% |
| Serine SER (S) | 52 | 7.9% |
| Arginine ARG (R) | 39 | 5.93% |
| Threonine THR (T) | 40 | 6.08% |
| Tryptophan TRP (W) | 8 | 1.22% |
| Valine VAL (V) | 44 | 6.69% |
| Tyrosine TYR (Y) | 22 | 3.34% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3316 |
| Hydrogen | H | 5167 |
| Nitrogen | N | 889 |
| Oxygen | O | 970 |
| Sulphur | S | 29 |
| Formula | C3316H5167N889O970S29 |
| Total Number of Atoms: | 10371 |
| Total number of positively charged residues (ARG + LYS): | 64 |
| Total number of negatively charged residues (ASP + GLU): | 69 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 77780 Absorption 0.1% (=1 g/l) 1.052, assuming all pairs of CYS residues form cystines Ext. coefficient 76780 Absorption 0.1% (=1 g/l) 1.038, assuming all CYS residues are reduced |
| Aromaticity: | 0.103 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 47.60 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.74, 24.32, 22.04] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 90.3648 |
| Grand average of hydropathicity (GRAVY): | -0.08 |