Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5172 |
| Number of amino acids: | 674 |
| Molecular Weight: | 74500.79 Da |
| Theoretical pI: | 7.54 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 47 | 6.97% |
| Cysteine CYS (C) | 16 | 2.37% |
| Glutamic Acid GLU (E) | 28 | 4.15% |
| Aspartic Acid ASP (D) | 34 | 5.04% |
| Glycine GLY (G) | 37 | 5.49% |
| Phynylalanine PHE (F) | 33 | 4.9% |
| Isoleucine ILE (I) | 36 | 5.34% |
| Histidine HIS (H) | 8 | 1.19% |
| Lysine LYS (K) | 30 | 4.45% |
| Methionine MET (M) | 12 | 1.78% |
| Leucine LEU (L) | 70 | 10.39% |
| Asparagine ASN (N) | 36 | 5.34% |
| Glutamine GLN (Q) | 27 | 4.01% |
| Proline PRO (P) | 36 | 5.34% |
| Serine SER (S) | 70 | 10.39% |
| Arginine ARG (R) | 33 | 4.9% |
| Threonine THR (T) | 50 | 7.42% |
| Tryptophan TRP (W) | 4 | 0.59% |
| Valine VAL (V) | 40 | 5.93% |
| Tyrosine TYR (Y) | 27 | 4.01% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3314 |
| Hydrogen | H | 5204 |
| Nitrogen | N | 886 |
| Oxygen | O | 1009 |
| Sulphur | S | 28 |
| Formula | C3314H5204N886O1009S28 |
| Total Number of Atoms: | 10441 |
| Total number of positively charged residues (ARG + LYS): | 63 |
| Total number of negatively charged residues (ASP + GLU): | 62 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 63230 Absorption 0.1% (=1 g/l) 0.849, assuming all pairs of CYS residues form cystines Ext. coefficient 62230 Absorption 0.1% (=1 g/l) 0.835, assuming all CYS residues are reduced |
| Aromaticity: | 0.095 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.95 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.16, 26.56, 23.29] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 85.5195 |
| Grand average of hydropathicity (GRAVY): | -0.14 |