Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5169 |
| Number of amino acids: | 839 |
| Molecular Weight: | 89355.71 Da |
| Theoretical pI: | 6.57 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 3.81% |
| Cysteine CYS (C) | 5 | 0.6% |
| Glutamic Acid GLU (E) | 15 | 1.79% |
| Aspartic Acid ASP (D) | 4 | 0.48% |
| Glycine GLY (G) | 162 | 19.31% |
| Phynylalanine PHE (F) | 4 | 0.48% |
| Isoleucine ILE (I) | 4 | 0.48% |
| Histidine HIS (H) | 5 | 0.6% |
| Lysine LYS (K) | 8 | 0.95% |
| Methionine MET (M) | 3 | 0.36% |
| Leucine LEU (L) | 38 | 4.53% |
| Asparagine ASN (N) | 0 | 0% |
| Glutamine GLN (Q) | 292 | 34.8% |
| Proline PRO (P) | 108 | 12.87% |
| Serine SER (S) | 46 | 5.48% |
| Arginine ARG (R) | 10 | 1.19% |
| Threonine THR (T) | 26 | 3.1% |
| Tryptophan TRP (W) | 9 | 1.07% |
| Valine VAL (V) | 22 | 2.62% |
| Tyrosine TYR (Y) | 46 | 5.48% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3832 |
| Hydrogen | H | 5780 |
| Nitrogen | N | 1188 |
| Oxygen | O | 1288 |
| Sulphur | S | 8 |
| Formula | C3832H5780N1188O1288S8 |
| Total Number of Atoms: | 12096 |
| Total number of positively charged residues (ARG + LYS): | 18 |
| Total number of negatively charged residues (ASP + GLU): | 19 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 118290 Absorption 0.1% (=1 g/l) 1.324, assuming all pairs of CYS residues form cystines Ext. coefficient 118040 Absorption 0.1% (=1 g/l) 1.321, assuming all CYS residues are reduced |
| Aromaticity: | 0.070 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 83.27 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [14.66, 37.66, 10.49] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 30.9416 |
| Grand average of hydropathicity (GRAVY): | -1.43 |