Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5168 |
| Number of amino acids: | 838 |
| Molecular Weight: | 89173.42 Da |
| Theoretical pI: | 5.84 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 29 | 3.46% |
| Cysteine CYS (C) | 4 | 0.48% |
| Glutamic Acid GLU (E) | 16 | 1.91% |
| Aspartic Acid ASP (D) | 4 | 0.48% |
| Glycine GLY (G) | 164 | 19.57% |
| Phynylalanine PHE (F) | 3 | 0.36% |
| Isoleucine ILE (I) | 4 | 0.48% |
| Histidine HIS (H) | 4 | 0.48% |
| Lysine LYS (K) | 7 | 0.84% |
| Methionine MET (M) | 3 | 0.36% |
| Leucine LEU (L) | 41 | 4.89% |
| Asparagine ASN (N) | 0 | 0% |
| Glutamine GLN (Q) | 292 | 34.84% |
| Proline PRO (P) | 107 | 12.77% |
| Serine SER (S) | 49 | 5.85% |
| Arginine ARG (R) | 10 | 1.19% |
| Threonine THR (T) | 25 | 2.98% |
| Tryptophan TRP (W) | 9 | 1.07% |
| Valine VAL (V) | 21 | 2.51% |
| Tyrosine TYR (Y) | 46 | 5.49% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3821 |
| Hydrogen | H | 5770 |
| Nitrogen | N | 1184 |
| Oxygen | O | 1291 |
| Sulphur | S | 7 |
| Formula | C3821H5770N1184O1291S7 |
| Total Number of Atoms: | 12073 |
| Total number of positively charged residues (ARG + LYS): | 17 |
| Total number of negatively charged residues (ASP + GLU): | 20 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 118290 Absorption 0.1% (=1 g/l) 1.327, assuming all pairs of CYS residues form cystines Ext. coefficient 118040 Absorption 0.1% (=1 g/l) 1.324, assuming all CYS residues are reduced |
| Aromaticity: | 0.069 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 85.39 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [14.80, 38.19, 10.62] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 31.6706 |
| Grand average of hydropathicity (GRAVY): | -1.43 |