Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5159 |
| Number of amino acids: | 592 |
| Molecular Weight: | 67397.78 Da |
| Theoretical pI: | 8.75 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 37 | 6.25% |
| Cysteine CYS (C) | 7 | 1.18% |
| Glutamic Acid GLU (E) | 20 | 3.38% |
| Aspartic Acid ASP (D) | 39 | 6.59% |
| Glycine GLY (G) | 40 | 6.76% |
| Phynylalanine PHE (F) | 31 | 5.24% |
| Isoleucine ILE (I) | 31 | 5.24% |
| Histidine HIS (H) | 17 | 2.87% |
| Lysine LYS (K) | 39 | 6.59% |
| Methionine MET (M) | 12 | 2.03% |
| Leucine LEU (L) | 44 | 7.43% |
| Asparagine ASN (N) | 31 | 5.24% |
| Glutamine GLN (Q) | 18 | 3.04% |
| Proline PRO (P) | 32 | 5.41% |
| Serine SER (S) | 44 | 7.43% |
| Arginine ARG (R) | 27 | 4.56% |
| Threonine THR (T) | 29 | 4.9% |
| Tryptophan TRP (W) | 20 | 3.38% |
| Valine VAL (V) | 47 | 7.94% |
| Tyrosine TYR (Y) | 27 | 4.56% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3075 |
| Hydrogen | H | 4643 |
| Nitrogen | N | 815 |
| Oxygen | O | 860 |
| Sulphur | S | 19 |
| Formula | C3075H4643N815O860S19 |
| Total Number of Atoms: | 9412 |
| Total number of positively charged residues (ARG + LYS): | 66 |
| Total number of negatively charged residues (ASP + GLU): | 59 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 150605 Absorption 0.1% (=1 g/l) 2.235, assuming all pairs of CYS residues form cystines Ext. coefficient 150230 Absorption 0.1% (=1 g/l) 2.229, assuming all CYS residues are reduced |
| Aromaticity: | 0.132 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 31.15 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.78, 24.83, 19.09] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 78.6824 |
| Grand average of hydropathicity (GRAVY): | -0.31 |