Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5151 |
| Number of amino acids: | 346 |
| Molecular Weight: | 38085.6 Da |
| Theoretical pI: | 7.69 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 27 | 7.8% |
| Cysteine CYS (C) | 8 | 2.31% |
| Glutamic Acid GLU (E) | 8 | 2.31% |
| Aspartic Acid ASP (D) | 30 | 8.67% |
| Glycine GLY (G) | 21 | 6.07% |
| Phynylalanine PHE (F) | 21 | 6.07% |
| Isoleucine ILE (I) | 16 | 4.62% |
| Histidine HIS (H) | 5 | 1.45% |
| Lysine LYS (K) | 20 | 5.78% |
| Methionine MET (M) | 9 | 2.6% |
| Leucine LEU (L) | 41 | 11.85% |
| Asparagine ASN (N) | 18 | 5.2% |
| Glutamine GLN (Q) | 12 | 3.47% |
| Proline PRO (P) | 15 | 4.34% |
| Serine SER (S) | 32 | 9.25% |
| Arginine ARG (R) | 19 | 5.49% |
| Threonine THR (T) | 17 | 4.91% |
| Tryptophan TRP (W) | 1 | 0.29% |
| Valine VAL (V) | 20 | 5.78% |
| Tyrosine TYR (Y) | 6 | 1.73% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1683 |
| Hydrogen | H | 2678 |
| Nitrogen | N | 464 |
| Oxygen | O | 508 |
| Sulphur | S | 17 |
| Formula | C1683H2678N464O508S17 |
| Total Number of Atoms: | 5350 |
| Total number of positively charged residues (ARG + LYS): | 39 |
| Total number of negatively charged residues (ASP + GLU): | 38 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 14940 Absorption 0.1% (=1 g/l) 0.392, assuming all pairs of CYS residues form cystines Ext. coefficient 14440 Absorption 0.1% (=1 g/l) 0.379, assuming all CYS residues are reduced |
| Aromaticity: | 0.081 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.46 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.35, 24.86, 24.57] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 88.815 |
| Grand average of hydropathicity (GRAVY): | -0.12 |