Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5142 |
| Number of amino acids: | 420 |
| Molecular Weight: | 47939.61 Da |
| Theoretical pI: | 4.52 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 31 | 7.38% |
| Cysteine CYS (C) | 2 | 0.48% |
| Glutamic Acid GLU (E) | 45 | 10.71% |
| Aspartic Acid ASP (D) | 58 | 13.81% |
| Glycine GLY (G) | 26 | 6.19% |
| Phynylalanine PHE (F) | 12 | 2.86% |
| Isoleucine ILE (I) | 27 | 6.43% |
| Histidine HIS (H) | 9 | 2.14% |
| Lysine LYS (K) | 53 | 12.62% |
| Methionine MET (M) | 3 | 0.71% |
| Leucine LEU (L) | 20 | 4.76% |
| Asparagine ASN (N) | 11 | 2.62% |
| Glutamine GLN (Q) | 10 | 2.38% |
| Proline PRO (P) | 24 | 5.71% |
| Serine SER (S) | 21 | 5% |
| Arginine ARG (R) | 6 | 1.43% |
| Threonine THR (T) | 19 | 4.52% |
| Tryptophan TRP (W) | 13 | 3.1% |
| Valine VAL (V) | 13 | 3.1% |
| Tyrosine TYR (Y) | 17 | 4.05% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2135 |
| Hydrogen | H | 3225 |
| Nitrogen | N | 543 |
| Oxygen | O | 705 |
| Sulphur | S | 5 |
| Formula | C2135H3225N543O705S5 |
| Total Number of Atoms: | 6613 |
| Total number of positively charged residues (ARG + LYS): | 59 |
| Total number of negatively charged residues (ASP + GLU): | 103 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 96955 Absorption 0.1% (=1 g/l) 2.022, assuming all pairs of CYS residues form cystines Ext. coefficient 96830 Absorption 0.1% (=1 g/l) 2.020, assuming all CYS residues are reduced |
| Aromaticity: | 0.100 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 34.02 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.29, 19.52, 23.57] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 60 |
| Grand average of hydropathicity (GRAVY): | -1.09 |