Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5138 |
| Number of amino acids: | 285 |
| Molecular Weight: | 32632.6 Da |
| Theoretical pI: | 9.15 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 17 | 5.96% |
| Cysteine CYS (C) | 13 | 4.56% |
| Glutamic Acid GLU (E) | 11 | 3.86% |
| Aspartic Acid ASP (D) | 16 | 5.61% |
| Glycine GLY (G) | 16 | 5.61% |
| Phynylalanine PHE (F) | 17 | 5.96% |
| Isoleucine ILE (I) | 14 | 4.91% |
| Histidine HIS (H) | 7 | 2.46% |
| Lysine LYS (K) | 21 | 7.37% |
| Methionine MET (M) | 6 | 2.11% |
| Leucine LEU (L) | 26 | 9.12% |
| Asparagine ASN (N) | 20 | 7.02% |
| Glutamine GLN (Q) | 9 | 3.16% |
| Proline PRO (P) | 10 | 3.51% |
| Serine SER (S) | 17 | 5.96% |
| Arginine ARG (R) | 19 | 6.67% |
| Threonine THR (T) | 13 | 4.56% |
| Tryptophan TRP (W) | 1 | 0.35% |
| Valine VAL (V) | 18 | 6.32% |
| Tyrosine TYR (Y) | 14 | 4.91% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1451 |
| Hydrogen | H | 2269 |
| Nitrogen | N | 407 |
| Oxygen | O | 413 |
| Sulphur | S | 19 |
| Formula | C1451H2269N407O413S19 |
| Total Number of Atoms: | 4559 |
| Total number of positively charged residues (ARG + LYS): | 40 |
| Total number of negatively charged residues (ASP + GLU): | 27 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 27110 Absorption 0.1% (=1 g/l) 0.831, assuming all pairs of CYS residues form cystines Ext. coefficient 26360 Absorption 0.1% (=1 g/l) 0.808, assuming all CYS residues are reduced |
| Aromaticity: | 0.112 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.54 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.58, 22.11, 21.05] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.0176 |
| Grand average of hydropathicity (GRAVY): | -0.32 |