Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5137 |
| Number of amino acids: | 290 |
| Molecular Weight: | 32003.75 Da |
| Theoretical pI: | 6.48 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 14 | 4.83% |
| Cysteine CYS (C) | 0 | 0% |
| Glutamic Acid GLU (E) | 7 | 2.41% |
| Aspartic Acid ASP (D) | 18 | 6.21% |
| Glycine GLY (G) | 18 | 6.21% |
| Phynylalanine PHE (F) | 15 | 5.17% |
| Isoleucine ILE (I) | 16 | 5.52% |
| Histidine HIS (H) | 4 | 1.38% |
| Lysine LYS (K) | 12 | 4.14% |
| Methionine MET (M) | 2 | 0.69% |
| Leucine LEU (L) | 30 | 10.34% |
| Asparagine ASN (N) | 24 | 8.28% |
| Glutamine GLN (Q) | 11 | 3.79% |
| Proline PRO (P) | 15 | 5.17% |
| Serine SER (S) | 36 | 12.41% |
| Arginine ARG (R) | 12 | 4.14% |
| Threonine THR (T) | 25 | 8.62% |
| Tryptophan TRP (W) | 5 | 1.72% |
| Valine VAL (V) | 17 | 5.86% |
| Tyrosine TYR (Y) | 9 | 3.1% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1429 |
| Hydrogen | H | 2216 |
| Nitrogen | N | 386 |
| Oxygen | O | 446 |
| Sulphur | S | 2 |
| Formula | C1429H2216N386O446S2 |
| Total Number of Atoms: | 4479 |
| Total number of positively charged residues (ARG + LYS): | 24 |
| Total number of negatively charged residues (ASP + GLU): | 25 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 40910 Absorption 0.1% (=1 g/l) 1.278 |
| Aromaticity: | 0.100 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.17 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.72, 32.07, 18.28] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.6895 |
| Grand average of hydropathicity (GRAVY): | -0.31 |