Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5131 |
| Number of amino acids: | 252 |
| Molecular Weight: | 26761.26 Da |
| Theoretical pI: | 8.91 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 27 | 10.71% |
| Cysteine CYS (C) | 8 | 3.17% |
| Glutamic Acid GLU (E) | 3 | 1.19% |
| Aspartic Acid ASP (D) | 10 | 3.97% |
| Glycine GLY (G) | 32 | 12.7% |
| Phynylalanine PHE (F) | 14 | 5.56% |
| Isoleucine ILE (I) | 12 | 4.76% |
| Histidine HIS (H) | 3 | 1.19% |
| Lysine LYS (K) | 9 | 3.57% |
| Methionine MET (M) | 5 | 1.98% |
| Leucine LEU (L) | 16 | 6.35% |
| Asparagine ASN (N) | 16 | 6.35% |
| Glutamine GLN (Q) | 7 | 2.78% |
| Proline PRO (P) | 9 | 3.57% |
| Serine SER (S) | 24 | 9.52% |
| Arginine ARG (R) | 10 | 3.97% |
| Threonine THR (T) | 14 | 5.56% |
| Tryptophan TRP (W) | 7 | 2.78% |
| Valine VAL (V) | 16 | 6.35% |
| Tyrosine TYR (Y) | 10 | 3.97% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1194 |
| Hydrogen | H | 1809 |
| Nitrogen | N | 327 |
| Oxygen | O | 350 |
| Sulphur | S | 13 |
| Formula | C1194H1809N327O350S13 |
| Total Number of Atoms: | 3693 |
| Total number of positively charged residues (ARG + LYS): | 19 |
| Total number of negatively charged residues (ASP + GLU): | 13 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 53900 Absorption 0.1% (=1 g/l) 2.014, assuming all pairs of CYS residues form cystines Ext. coefficient 53400 Absorption 0.1% (=1 g/l) 1.995, assuming all CYS residues are reduced |
| Aromaticity: | 0.123 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 28.68 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.76, 32.14, 20.24] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 72.4603 |
| Grand average of hydropathicity (GRAVY): | 0.03 |