Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5127 |
| Number of amino acids: | 918 |
| Molecular Weight: | 103541.3 Da |
| Theoretical pI: | 6.49 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 57 | 6.21% |
| Cysteine CYS (C) | 5 | 0.54% |
| Glutamic Acid GLU (E) | 57 | 6.21% |
| Aspartic Acid ASP (D) | 47 | 5.12% |
| Glycine GLY (G) | 53 | 5.77% |
| Phynylalanine PHE (F) | 59 | 6.43% |
| Isoleucine ILE (I) | 61 | 6.64% |
| Histidine HIS (H) | 19 | 2.07% |
| Lysine LYS (K) | 53 | 5.77% |
| Methionine MET (M) | 24 | 2.61% |
| Leucine LEU (L) | 94 | 10.24% |
| Asparagine ASN (N) | 38 | 4.14% |
| Glutamine GLN (Q) | 24 | 2.61% |
| Proline PRO (P) | 34 | 3.7% |
| Serine SER (S) | 79 | 8.61% |
| Arginine ARG (R) | 46 | 5.01% |
| Threonine THR (T) | 51 | 5.56% |
| Tryptophan TRP (W) | 13 | 1.42% |
| Valine VAL (V) | 77 | 8.39% |
| Tyrosine TYR (Y) | 27 | 2.94% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4708 |
| Hydrogen | H | 7354 |
| Nitrogen | N | 1222 |
| Oxygen | O | 1346 |
| Sulphur | S | 29 |
| Formula | C4708H7354N1222O1346S29 |
| Total Number of Atoms: | 14659 |
| Total number of positively charged residues (ARG + LYS): | 99 |
| Total number of negatively charged residues (ASP + GLU): | 104 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 111980 Absorption 0.1% (=1 g/l) 1.081, assuming all pairs of CYS residues form cystines Ext. coefficient 111730 Absorption 0.1% (=1 g/l) 1.079, assuming all CYS residues are reduced |
| Aromaticity: | 0.108 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.16 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [36.06, 22.22, 25.27] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 96.3836 |
| Grand average of hydropathicity (GRAVY): | 0.01 |