Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5104 |
| Number of amino acids: | 192 |
| Molecular Weight: | 20395.74 Da |
| Theoretical pI: | 6.09 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 20 | 10.42% |
| Cysteine CYS (C) | 11 | 5.73% |
| Glutamic Acid GLU (E) | 8 | 4.17% |
| Aspartic Acid ASP (D) | 15 | 7.81% |
| Glycine GLY (G) | 20 | 10.42% |
| Phynylalanine PHE (F) | 2 | 1.04% |
| Isoleucine ILE (I) | 5 | 2.6% |
| Histidine HIS (H) | 4 | 2.08% |
| Lysine LYS (K) | 7 | 3.65% |
| Methionine MET (M) | 2 | 1.04% |
| Leucine LEU (L) | 14 | 7.29% |
| Asparagine ASN (N) | 10 | 5.21% |
| Glutamine GLN (Q) | 3 | 1.56% |
| Proline PRO (P) | 9 | 4.69% |
| Serine SER (S) | 15 | 7.81% |
| Arginine ARG (R) | 14 | 7.29% |
| Threonine THR (T) | 12 | 6.25% |
| Tryptophan TRP (W) | 3 | 1.56% |
| Valine VAL (V) | 13 | 6.77% |
| Tyrosine TYR (Y) | 5 | 2.6% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 861 |
| Hydrogen | H | 1371 |
| Nitrogen | N | 265 |
| Oxygen | O | 284 |
| Sulphur | S | 13 |
| Formula | C861H1371N265O284S13 |
| Total Number of Atoms: | 2794 |
| Total number of positively charged residues (ARG + LYS): | 21 |
| Total number of negatively charged residues (ASP + GLU): | 23 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 24575 Absorption 0.1% (=1 g/l) 1.205, assuming all pairs of CYS residues form cystines Ext. coefficient 23950 Absorption 0.1% (=1 g/l) 1.174, assuming all CYS residues are reduced |
| Aromaticity: | 0.052 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 56.46 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [21.88, 28.12, 22.92] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 68.6459 |
| Grand average of hydropathicity (GRAVY): | -0.41 |