Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5102 |
| Number of amino acids: | 459 |
| Molecular Weight: | 51830.33 Da |
| Theoretical pI: | 7.84 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 34 | 7.41% |
| Cysteine CYS (C) | 5 | 1.09% |
| Glutamic Acid GLU (E) | 33 | 7.19% |
| Aspartic Acid ASP (D) | 18 | 3.92% |
| Glycine GLY (G) | 33 | 7.19% |
| Phynylalanine PHE (F) | 18 | 3.92% |
| Isoleucine ILE (I) | 20 | 4.36% |
| Histidine HIS (H) | 11 | 2.4% |
| Lysine LYS (K) | 9 | 1.96% |
| Methionine MET (M) | 15 | 3.27% |
| Leucine LEU (L) | 35 | 7.63% |
| Asparagine ASN (N) | 21 | 4.58% |
| Glutamine GLN (Q) | 38 | 8.28% |
| Proline PRO (P) | 19 | 4.14% |
| Serine SER (S) | 36 | 7.84% |
| Arginine ARG (R) | 43 | 9.37% |
| Threonine THR (T) | 23 | 5.01% |
| Tryptophan TRP (W) | 4 | 0.87% |
| Valine VAL (V) | 32 | 6.97% |
| Tyrosine TYR (Y) | 12 | 2.61% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2246 |
| Hydrogen | H | 3560 |
| Nitrogen | N | 682 |
| Oxygen | O | 692 |
| Sulphur | S | 20 |
| Formula | C2246H3560N682O692S20 |
| Total Number of Atoms: | 7200 |
| Total number of positively charged residues (ARG + LYS): | 52 |
| Total number of negatively charged residues (ASP + GLU): | 51 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 40130 Absorption 0.1% (=1 g/l) 0.774, assuming all pairs of CYS residues form cystines Ext. coefficient 39880 Absorption 0.1% (=1 g/l) 0.769, assuming all CYS residues are reduced |
| Aromaticity: | 0.074 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 49.27 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.36, 23.75, 25.49] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.3573 |
| Grand average of hydropathicity (GRAVY): | -0.54 |