Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5100 |
| Number of amino acids: | 662 |
| Molecular Weight: | 74586.38 Da |
| Theoretical pI: | 8.36 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 35 | 5.29% |
| Cysteine CYS (C) | 15 | 2.27% |
| Glutamic Acid GLU (E) | 36 | 5.44% |
| Aspartic Acid ASP (D) | 32 | 4.83% |
| Glycine GLY (G) | 50 | 7.55% |
| Phynylalanine PHE (F) | 45 | 6.8% |
| Isoleucine ILE (I) | 42 | 6.34% |
| Histidine HIS (H) | 10 | 1.51% |
| Lysine LYS (K) | 34 | 5.14% |
| Methionine MET (M) | 14 | 2.11% |
| Leucine LEU (L) | 63 | 9.52% |
| Asparagine ASN (N) | 35 | 5.29% |
| Glutamine GLN (Q) | 20 | 3.02% |
| Proline PRO (P) | 28 | 4.23% |
| Serine SER (S) | 57 | 8.61% |
| Arginine ARG (R) | 39 | 5.89% |
| Threonine THR (T) | 34 | 5.14% |
| Tryptophan TRP (W) | 7 | 1.06% |
| Valine VAL (V) | 40 | 6.04% |
| Tyrosine TYR (Y) | 26 | 3.93% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3359 |
| Hydrogen | H | 5199 |
| Nitrogen | N | 895 |
| Oxygen | O | 971 |
| Sulphur | S | 29 |
| Formula | C3359H5199N895O971S29 |
| Total Number of Atoms: | 10453 |
| Total number of positively charged residues (ARG + LYS): | 73 |
| Total number of negatively charged residues (ASP + GLU): | 68 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 78115 Absorption 0.1% (=1 g/l) 1.047, assuming all pairs of CYS residues form cystines Ext. coefficient 77240 Absorption 0.1% (=1 g/l) 1.036, assuming all CYS residues are reduced |
| Aromaticity: | 0.118 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 43.02 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.69, 25.68, 22.36] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 84.6677 |
| Grand average of hydropathicity (GRAVY): | -0.14 |