Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5099 |
| Number of amino acids: | 437 |
| Molecular Weight: | 49784.58 Da |
| Theoretical pI: | 6.41 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 14 | 3.2% |
| Cysteine CYS (C) | 10 | 2.29% |
| Glutamic Acid GLU (E) | 24 | 5.49% |
| Aspartic Acid ASP (D) | 20 | 4.58% |
| Glycine GLY (G) | 34 | 7.78% |
| Phynylalanine PHE (F) | 15 | 3.43% |
| Isoleucine ILE (I) | 34 | 7.78% |
| Histidine HIS (H) | 14 | 3.2% |
| Lysine LYS (K) | 25 | 5.72% |
| Methionine MET (M) | 9 | 2.06% |
| Leucine LEU (L) | 41 | 9.38% |
| Asparagine ASN (N) | 27 | 6.18% |
| Glutamine GLN (Q) | 14 | 3.2% |
| Proline PRO (P) | 23 | 5.26% |
| Serine SER (S) | 38 | 8.7% |
| Arginine ARG (R) | 15 | 3.43% |
| Threonine THR (T) | 23 | 5.26% |
| Tryptophan TRP (W) | 10 | 2.29% |
| Valine VAL (V) | 19 | 4.35% |
| Tyrosine TYR (Y) | 28 | 6.41% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2250 |
| Hydrogen | H | 3420 |
| Nitrogen | N | 586 |
| Oxygen | O | 656 |
| Sulphur | S | 19 |
| Formula | C2250H3420N586O656S19 |
| Total Number of Atoms: | 6931 |
| Total number of positively charged residues (ARG + LYS): | 40 |
| Total number of negatively charged residues (ASP + GLU): | 44 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 97345 Absorption 0.1% (=1 g/l) 1.955, assuming all pairs of CYS residues form cystines Ext. coefficient 96720 Absorption 0.1% (=1 g/l) 1.943, assuming all CYS residues are reduced |
| Aromaticity: | 0.121 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.27 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.64, 27.92, 20.14] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.746 |
| Grand average of hydropathicity (GRAVY): | -0.35 |